A C D E F M O P S T

A

addSnomedId(Candidate) - Method in class org.t3as.snomedct.lookup.SnomedLookup

Tries to find this candidate in the SNOMED CT database, and if found adds the SNOMED id and term type to the instance.

C

close() - Method in class org.t3as.snomedct.lookup.CreateLookupDb

close() - Method in class org.t3as.snomedct.lookup.SnomedLookup

CreateDb - Class in org.t3as.snomedct.lookup.cmdline

CreateDb() - Constructor for class org.t3as.snomedct.lookup.cmdline.CreateDb

CreateLookupDb - Class in org.t3as.snomedct.lookup

CreateLookupDb(File, File) - Constructor for class org.t3as.snomedct.lookup.CreateLookupDb

cui - Variable in class org.t3as.snomedct.lookup.SnomedTerm

D

description - Variable in class org.t3as.snomedct.lookup.SnomedTerm

E

enrichXml(MMOs) - Method in class org.t3as.snomedct.lookup.SnomedLookup

Tries to look up each Mapping Candidate in the SNOMED CT db to add more data.

F

findFromCuiAndDesc(String, String) - Method in class org.t3as.snomedct.lookup.SnomedLookup

findFromSnomedId(String) - Method in class org.t3as.snomedct.lookup.SnomedLookup

M

main(String[]) - Static method in class org.t3as.snomedct.lookup.cmdline.CreateDb

Main - Class in org.t3as.snomedct.lookup.cmdline

Reads the --XMLf1 output generated by the metamap-tagger tool and does lookups for the corresponding SNOMED CT concepts in UMLS, enriching and printing the XML out.

Main() - Constructor for class org.t3as.snomedct.lookup.cmdline.Main

main(String[]) - Static method in class org.t3as.snomedct.lookup.cmdline.Main

O

org.t3as.snomedct.lookup - package org.t3as.snomedct.lookup

org.t3as.snomedct.lookup.cmdline - package org.t3as.snomedct.lookup.cmdline

P

process() - Method in class org.t3as.snomedct.lookup.CreateLookupDb

S

snomedId - Variable in class org.t3as.snomedct.lookup.SnomedTerm

SnomedLookup - Class in org.t3as.snomedct.lookup

SnomedLookup(File) - Constructor for class org.t3as.snomedct.lookup.SnomedLookup

SnomedTerm - Class in org.t3as.snomedct.lookup

SnomedTerm(String, String, String, String) - Constructor for class org.t3as.snomedct.lookup.SnomedTerm

T

termType - Variable in class org.t3as.snomedct.lookup.SnomedTerm

toString() - Method in class org.t3as.snomedct.lookup.SnomedTerm

A C D E F M O P S T