org.helm.notation2

Class Attachment

java.lang.Object

org.helm.notation2.Attachment

All Implemented Interfaces:

Serializable

public class Attachment
extends Object
implements Serializable

This is a data model for Attachment point on monomer

Author:

zhangtianhong

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
static String	BACKBONE_MONOMER_BRANCH_ATTACHEMENT
static String	BACKBONE_MONOMER_LEFT_ATTACHEMENT
static String	BACKBONE_MONOMER_RIGHT_ATTACHEMENT
static String	BRANCH_MONOMER_ATTACHEMENT
static String	CAP_GROUP_H
static String	CAP_GROUP_OH
static String	PAIR_ATTACHMENT
static String	STARTING_MONOMER_ATTACHEMENT

Constructor Summary

Constructors

Constructor and Description
Attachment()
Attachment(String label, String capGroupName)

Method Summary

Methods

Modifier and Type	Method and Description
String	getAlternateId()
String	getCapGroupName()
String	getCapGroupSMILES()
int	getId()
String	getLabel()
void	setAlternateId(String alternateId)
void	setCapGroupName(String capGroupName)
void	setCapGroupSMILES(String capGroupSMILES)
void	setId(int id)
void	setLabel(String label)
String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

BACKBONE_MONOMER_LEFT_ATTACHEMENT

public static final String BACKBONE_MONOMER_LEFT_ATTACHEMENT

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Constant Field Values

BACKBONE_MONOMER_RIGHT_ATTACHEMENT

public static final String BACKBONE_MONOMER_RIGHT_ATTACHEMENT

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Constant Field Values

BACKBONE_MONOMER_BRANCH_ATTACHEMENT

public static final String BACKBONE_MONOMER_BRANCH_ATTACHEMENT

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Constant Field Values

BRANCH_MONOMER_ATTACHEMENT

public static final String BRANCH_MONOMER_ATTACHEMENT

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Constant Field Values

STARTING_MONOMER_ATTACHEMENT

public static final String STARTING_MONOMER_ATTACHEMENT

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Constant Field Values

CAP_GROUP_OH

public static final String CAP_GROUP_OH

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Constant Field Values

CAP_GROUP_H

public static final String CAP_GROUP_H

See Also:

Constant Field Values

PAIR_ATTACHMENT

public static final String PAIR_ATTACHMENT

See Also:

Constant Field Values

Constructor Detail

Attachment

public Attachment()

Attachment

public Attachment(String label,
          String capGroupName)

Method Detail

getId

public int getId()

setId

public void setId(int id)

getAlternateId

public String getAlternateId()

setAlternateId

public void setAlternateId(String alternateId)

getLabel

public String getLabel()

setLabel

public void setLabel(String label)

getCapGroupName

public String getCapGroupName()

setCapGroupName

public void setCapGroupName(String capGroupName)

getCapGroupSMILES

public String getCapGroupSMILES()

setCapGroupSMILES

public void setCapGroupSMILES(String capGroupSMILES)

toString

public String toString()

Overrides:

toString in class Object