Package org.biopax.paxtools.impl.level3

Class PhenotypeVocabularyImpl

java.lang.Object

org.biopax.paxtools.impl.BioPAXElementImpl

org.biopax.paxtools.impl.level3.L3ElementImpl

org.biopax.paxtools.impl.level3.XReferrableImpl

org.biopax.paxtools.impl.level3.ControlledVocabularyImpl

org.biopax.paxtools.impl.level3.PhenotypeVocabularyImpl

All Implemented Interfaces:

Serializable, Cloneable, BioPAXElement, ControlledVocabulary, Level3Element, PhenotypeVocabulary, UtilityClass, XReferrable

public class PhenotypeVocabularyImpl
extends ControlledVocabularyImpl
implements PhenotypeVocabulary

See Also:

• Serialized Form

Field Summary

Fields inherited from interface org.biopax.paxtools.model.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Constructor Summary

Constructors

Constructor	Description
PhenotypeVocabularyImpl()

Method Summary

Modifier and Type	Method	Description
Class<? extends PhenotypeVocabulary>	getModelInterface()	This method returns the actual model interface that a class implements.
String	getPatoData()
void	setPatoData(String patoData)

Methods inherited from class org.biopax.paxtools.impl.level3.ControlledVocabularyImpl

addTerm, getTerm, removeTerm, semanticallyEquivalent, setTerm, toString

Methods inherited from class org.biopax.paxtools.impl.level3.XReferrableImpl

addXref, equivalenceCode, getXref, removeXref, setXref

Methods inherited from class org.biopax.paxtools.impl.level3.L3ElementImpl

addComment, getComment, removeComment, setComment

Methods inherited from class org.biopax.paxtools.impl.BioPAXElementImpl

equals, getAnnotations, getUri, hashCode, isEquivalent

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.biopax.paxtools.model.BioPAXElement

equivalenceCode, getAnnotations, getUri, isEquivalent

Methods inherited from interface org.biopax.paxtools.model.level3.ControlledVocabulary

addTerm, getTerm, removeTerm

Methods inherited from interface org.biopax.paxtools.model.level3.Level3Element

addComment, getComment, removeComment

Methods inherited from interface org.biopax.paxtools.model.level3.XReferrable

addXref, getXref, removeXref

Constructor Details

PhenotypeVocabularyImpl

public PhenotypeVocabularyImpl()

Method Details

getModelInterface

public Class<? extends PhenotypeVocabulary> getModelInterface()

Description copied from interface: BioPAXElement

This method returns the actual model interface that a class implements.

Specified by:

getModelInterface in interface BioPAXElement

Overrides:

getModelInterface in class ControlledVocabularyImpl

Returns:

an interface from org.biopax.paxtools.model package corresponding to a BioPAX class.

getPatoData

public String getPatoData()

Specified by:

getPatoData in interface PhenotypeVocabulary

setPatoData

public void setPatoData(String patoData)

Specified by:

setPatoData in interface PhenotypeVocabulary