Package org.biopax.paxtools.model.level3

Interface Score

All Superinterfaces:
BioPAXElement, Cloneable, Level3Element, Serializable, UtilityClass, XReferrable
All Known Implementing Classes:
ScoreImpl
public interface Score extends UtilityClass, XReferrable
Definition: A score associated with a publication reference describing how the score was determined, the name of the method and a comment briefly describing the method. Usage: The xref must contain at least one publication that describes the method used to determine the score value. There is currently no standard way of describing values, so any string is valid. Examples: The statistical significance of a result, e.g. "p<0.05".

  • Method Details

    • getValue

      String getValue()
      This property defines the value of the score. This can be a numerical or categorical value.
      Returns:
      Numerical or categorical value of the score

    • setValue

      void setValue(String value)
      This property defines the value of the score. This can be a numerical or categorical value.
      Parameters:
      value - Numerical or categorical value of the score

    • getScoreSource

      Provenance getScoreSource()
      This property defines the source of the scoring methodology.
      Returns:
      A publication or web site describing the scoring methodology and the range of values.

    • setScoreSource

      void setScoreSource(Provenance scoreSource)
      This property defines the source of the scoring methodology.
      Parameters:
      scoreSource - publication or web site describing the scoring methodology and the range of values.