org.biopax.paxtools.impl.level3 Class Hierarchy (Paxtools Core (BioPAX object model, I/O API, implementation and extras) 5.2.1 API)

Package Hierarchies:

All Packages

Class Hierarchy

java.lang.Object
- org.biopax.paxtools.impl.BioPAXElementImpl (implements org.biopax.paxtools.model.BioPAXElement)
  - org.biopax.paxtools.impl.level3.L3ElementImpl (implements org.biopax.paxtools.model.level3.Level3Element)
    - org.biopax.paxtools.impl.level3.ChemicalConstantImpl (implements org.biopax.paxtools.model.level3.ChemicalConstant)
      - org.biopax.paxtools.impl.level3.DeltaGImpl (implements org.biopax.paxtools.model.level3.DeltaG)
      - org.biopax.paxtools.impl.level3.KPrimeImpl (implements org.biopax.paxtools.model.level3.KPrime)
    - org.biopax.paxtools.impl.level3.ChemicalStructureImpl (implements org.biopax.paxtools.model.level3.ChemicalStructure)
    - org.biopax.paxtools.impl.level3.EntityFeatureImpl (implements org.biopax.paxtools.model.level3.EntityFeature)
      - org.biopax.paxtools.impl.level3.BindingFeatureImpl (implements org.biopax.paxtools.model.level3.BindingFeature)
        
        org.biopax.paxtools.impl.level3.CovalentBindingFeatureImpl (implements org.biopax.paxtools.model.level3.CovalentBindingFeature)
      - org.biopax.paxtools.impl.level3.FragmentFeatureImpl (implements org.biopax.paxtools.model.level3.FragmentFeature)
      - org.biopax.paxtools.impl.level3.ModificationFeatureImpl (implements org.biopax.paxtools.model.level3.ModificationFeature)
    - org.biopax.paxtools.impl.level3.ExperimentalFormImpl (implements org.biopax.paxtools.model.level3.ExperimentalForm)
    - org.biopax.paxtools.impl.level3.PathwayStepImpl (implements org.biopax.paxtools.model.level3.PathwayStep)
      - org.biopax.paxtools.impl.level3.BiochemicalPathwayStepImpl (implements org.biopax.paxtools.model.level3.BiochemicalPathwayStep)
    - org.biopax.paxtools.impl.level3.SequenceLocationImpl (implements org.biopax.paxtools.model.level3.SequenceLocation)
      - org.biopax.paxtools.impl.level3.SequenceIntervalImpl (implements org.biopax.paxtools.model.level3.SequenceInterval)
      - org.biopax.paxtools.impl.level3.SequenceSiteImpl (implements org.biopax.paxtools.model.level3.SequenceSite)
    - org.biopax.paxtools.impl.level3.StoichiometryImpl (implements org.biopax.paxtools.model.level3.Stoichiometry)
    - org.biopax.paxtools.impl.level3.XReferrableImpl (implements org.biopax.paxtools.model.level3.XReferrable)
      - org.biopax.paxtools.impl.level3.ControlledVocabularyImpl (implements org.biopax.paxtools.model.level3.ControlledVocabulary)
        
        org.biopax.paxtools.impl.level3.CellularLocationVocabularyImpl (implements org.biopax.paxtools.model.level3.CellularLocationVocabulary)
        
        org.biopax.paxtools.impl.level3.CellVocabularyImpl (implements org.biopax.paxtools.model.level3.CellVocabulary)
        
        org.biopax.paxtools.impl.level3.EntityReferenceTypeVocabularyImpl (implements org.biopax.paxtools.model.level3.EntityReferenceTypeVocabulary)
        
        org.biopax.paxtools.impl.level3.EvidenceCodeVocabularyImpl (implements org.biopax.paxtools.model.level3.EvidenceCodeVocabulary)
        
        org.biopax.paxtools.impl.level3.ExperimentalFormVocabularyImpl (implements org.biopax.paxtools.model.level3.ExperimentalFormVocabulary)
        
        org.biopax.paxtools.impl.level3.InteractionVocabularyImpl (implements org.biopax.paxtools.model.level3.InteractionVocabulary)
        
        org.biopax.paxtools.impl.level3.PhenotypeVocabularyImpl (implements org.biopax.paxtools.model.level3.PhenotypeVocabulary)
        
        org.biopax.paxtools.impl.level3.RelationshipTypeVocabularyImpl (implements org.biopax.paxtools.model.level3.RelationshipTypeVocabulary)
        
        org.biopax.paxtools.impl.level3.SequenceModificationVocabularyImpl (implements org.biopax.paxtools.model.level3.SequenceModificationVocabulary)
        
        org.biopax.paxtools.impl.level3.SequenceRegionVocabularyImpl (implements org.biopax.paxtools.model.level3.SequenceRegionVocabulary)
        
        org.biopax.paxtools.impl.level3.TissueVocabularyImpl (implements org.biopax.paxtools.model.level3.TissueVocabulary)
      - org.biopax.paxtools.impl.level3.EvidenceImpl (implements org.biopax.paxtools.model.level3.Evidence)
      - org.biopax.paxtools.impl.level3.NamedImpl (implements org.biopax.paxtools.model.level3.Named)
        
        org.biopax.paxtools.impl.level3.BioSourceImpl (implements org.biopax.paxtools.model.level3.BioSource)
        
        org.biopax.paxtools.impl.level3.EntityImpl (implements org.biopax.paxtools.model.level3.Entity)
        
        org.biopax.paxtools.impl.level3.GeneImpl (implements org.biopax.paxtools.model.level3.Gene)
        
        org.biopax.paxtools.impl.level3.PhysicalEntityImpl (implements org.biopax.paxtools.model.level3.PhysicalEntity)
        
        org.biopax.paxtools.impl.level3.ComplexImpl (implements org.biopax.paxtools.model.level3.Complex)
        
        org.biopax.paxtools.impl.level3.SimplePhysicalEntityImpl (implements org.biopax.paxtools.model.level3.SimplePhysicalEntity)
        
        org.biopax.paxtools.impl.level3.NucleicAcidImpl (implements org.biopax.paxtools.model.level3.NucleicAcid)
        
        org.biopax.paxtools.impl.level3.DnaImpl (implements org.biopax.paxtools.model.level3.Dna)
        
        org.biopax.paxtools.impl.level3.DnaRegionImpl (implements org.biopax.paxtools.model.level3.DnaRegion)
        
        org.biopax.paxtools.impl.level3.RnaImpl (implements org.biopax.paxtools.model.level3.Rna)
        
        org.biopax.paxtools.impl.level3.RnaRegionImpl (implements org.biopax.paxtools.model.level3.RnaRegion)
        
        org.biopax.paxtools.impl.level3.ProteinImpl (implements org.biopax.paxtools.model.level3.Protein)
        
        org.biopax.paxtools.impl.level3.SmallMoleculeImpl (implements org.biopax.paxtools.model.level3.SmallMolecule)
        
        org.biopax.paxtools.impl.level3.ProcessImpl (implements org.biopax.paxtools.model.level3.Process)
        
        org.biopax.paxtools.impl.level3.InteractionImpl (implements org.biopax.paxtools.model.level3.Interaction)
        
        org.biopax.paxtools.impl.level3.ControlImpl (implements org.biopax.paxtools.model.level3.Control)
        
        org.biopax.paxtools.impl.level3.CatalysisImpl (implements org.biopax.paxtools.model.level3.Catalysis)
        
        org.biopax.paxtools.impl.level3.ModulationImpl (implements org.biopax.paxtools.model.level3.Modulation)
        
        org.biopax.paxtools.impl.level3.TemplateReactionRegulationImpl (implements org.biopax.paxtools.model.level3.TemplateReactionRegulation)
        
        org.biopax.paxtools.impl.level3.ConversionImpl (implements org.biopax.paxtools.model.level3.Conversion)
        
        org.biopax.paxtools.impl.level3.BiochemicalReactionImpl (implements org.biopax.paxtools.model.level3.BiochemicalReaction)
        
        org.biopax.paxtools.impl.level3.TransportWithBiochemicalReactionImpl (implements org.biopax.paxtools.model.level3.TransportWithBiochemicalReaction)
        
        org.biopax.paxtools.impl.level3.ComplexAssemblyImpl (implements org.biopax.paxtools.model.level3.ComplexAssembly)
        
        org.biopax.paxtools.impl.level3.DegradationImpl (implements org.biopax.paxtools.model.level3.Degradation)
        
        org.biopax.paxtools.impl.level3.TransportImpl (implements org.biopax.paxtools.model.level3.Transport)
        
        org.biopax.paxtools.impl.level3.GeneticInteractionImpl (implements org.biopax.paxtools.model.level3.GeneticInteraction)
        
        org.biopax.paxtools.impl.level3.MolecularInteractionImpl (implements org.biopax.paxtools.model.level3.MolecularInteraction)
        
        org.biopax.paxtools.impl.level3.TemplateReactionImpl (implements org.biopax.paxtools.model.level3.TemplateReaction)
        
        org.biopax.paxtools.impl.level3.PathwayImpl (implements org.biopax.paxtools.model.level3.Pathway)
        
        org.biopax.paxtools.impl.level3.EntityReferenceImpl (implements org.biopax.paxtools.model.level3.EntityReference)
        
        org.biopax.paxtools.impl.level3.SequenceEntityReferenceImpl (implements org.biopax.paxtools.model.level3.SequenceEntityReference)
        
        org.biopax.paxtools.impl.level3.NucleicAcidReferenceImpl (implements org.biopax.paxtools.model.level3.NucleicAcidReference)
        
        org.biopax.paxtools.impl.level3.DnaReferenceImpl (implements org.biopax.paxtools.model.level3.DnaReference)
        
        org.biopax.paxtools.impl.level3.NucleicAcidRegionReferenceImpl (implements org.biopax.paxtools.model.level3.NucleicAcidRegionReference)
        
        org.biopax.paxtools.impl.level3.DnaRegionReferenceImpl (implements org.biopax.paxtools.model.level3.DnaRegionReference)
        
        org.biopax.paxtools.impl.level3.RnaRegionReferenceImpl (implements org.biopax.paxtools.model.level3.RnaRegionReference)
        
        org.biopax.paxtools.impl.level3.RnaReferenceImpl (implements org.biopax.paxtools.model.level3.RnaReference)
        
        org.biopax.paxtools.impl.level3.ProteinReferenceImpl (implements org.biopax.paxtools.model.level3.ProteinReference)
        
        org.biopax.paxtools.impl.level3.SmallMoleculeReferenceImpl (implements org.biopax.paxtools.model.level3.SmallMoleculeReference)
        
        org.biopax.paxtools.impl.level3.ProvenanceImpl (implements org.biopax.paxtools.model.level3.Provenance)
      - org.biopax.paxtools.impl.level3.ScoreImpl (implements org.biopax.paxtools.model.level3.Score)
    - org.biopax.paxtools.impl.level3.XrefImpl (implements org.biopax.paxtools.model.level3.Xref)
      - org.biopax.paxtools.impl.level3.PublicationXrefImpl (implements org.biopax.paxtools.model.level3.PublicationXref)
      - org.biopax.paxtools.impl.level3.RelationshipXrefImpl (implements org.biopax.paxtools.model.level3.RelationshipXref)
      - org.biopax.paxtools.impl.level3.UnificationXrefImpl (implements org.biopax.paxtools.model.level3.UnificationXref)

Hierarchy For Package org.biopax.paxtools.impl.level3

Class Hierarchy