Uses of Interface
org.biopax.paxtools.model.level3.SequenceLocation

Packages that use SequenceLocation

Package	Description
org.biopax.paxtools.impl.level3	This package contains the default implementation for BioPAX Level 3.
org.biopax.paxtools.model.level3	This package contains the interfaces that maps classes defined in the BioPAX Level 3 specification.

Uses of SequenceLocation in org.biopax.paxtools.impl.level3

Classes in org.biopax.paxtools.impl.level3 that implement SequenceLocation

Modifier and Type	Class and Description
class	SequenceIntervalImpl
class	SequenceLocationImpl
class	SequenceSiteImpl

Methods in org.biopax.paxtools.impl.level3 that return SequenceLocation

Modifier and Type	Method and Description
SequenceLocation	NucleicAcidRegionReferenceImpl.getAbsoluteRegion()
SequenceLocation	EntityFeatureImpl.getFeatureLocation()

Methods in org.biopax.paxtools.impl.level3 that return types with arguments of type SequenceLocation

Modifier and Type	Method and Description
Class<? extends SequenceLocation>	SequenceLocationImpl.getModelInterface()

Methods in org.biopax.paxtools.impl.level3 with parameters of type SequenceLocation

Modifier and Type	Method and Description
void	NucleicAcidRegionReferenceImpl.setAbsoluteRegion(SequenceLocation absoluteRegion)
void	EntityFeatureImpl.setFeatureLocation(SequenceLocation featureLocation)

Uses of SequenceLocation in org.biopax.paxtools.model.level3

Subinterfaces of SequenceLocation in org.biopax.paxtools.model.level3

Modifier and Type	Interface and Description
interface	SequenceInterval
interface	SequenceSite

Methods in org.biopax.paxtools.model.level3 that return SequenceLocation

Modifier and Type	Method and Description
SequenceLocation	NucleicAcidRegionReference.getAbsoluteRegion()
SequenceLocation	EntityFeature.getFeatureLocation() Location of the feature on the sequence of the interactor.

Methods in org.biopax.paxtools.model.level3 with parameters of type SequenceLocation

Modifier and Type	Method and Description
void	NucleicAcidRegionReference.setAbsoluteRegion(SequenceLocation absoluteRegion)
void	EntityFeature.setFeatureLocation(SequenceLocation sequenceLocation) Location of the feature on the sequence of the interactor.