Uses of Interface
org.biopax.paxtools.model.level3.PathwayStep

Packages that use PathwayStep

Package	Description
org.biopax.paxtools.impl.level3	This package contains the default implementation for BioPAX Level 3.
org.biopax.paxtools.model.level3	This package contains the interfaces that maps classes defined in the BioPAX Level 3 specification.

Uses of PathwayStep in org.biopax.paxtools.impl.level3

Classes in org.biopax.paxtools.impl.level3 that implement PathwayStep

Modifier and Type	Class and Description
class	BiochemicalPathwayStepImpl
class	PathwayStepImpl

Methods in org.biopax.paxtools.impl.level3 that return types with arguments of type PathwayStep

Modifier and Type	Method and Description
Class<? extends PathwayStep>	PathwayStepImpl.getModelInterface()
Set<PathwayStep>	PathwayStepImpl.getNextStep()
Set<PathwayStep>	PathwayStepImpl.getNextStepOf()
Set<PathwayStep>	PathwayImpl.getPathwayOrder()
Set<PathwayStep>	ProcessImpl.getStepProcessOf()

Methods in org.biopax.paxtools.impl.level3 with parameters of type PathwayStep

Modifier and Type	Method and Description
void	PathwayStepImpl.addNextStep(PathwayStep nextStep)
void	PathwayImpl.addPathwayOrder(PathwayStep pathwayOrder)
void	PathwayStepImpl.removeNextStep(PathwayStep nextStep)
void	PathwayImpl.removePathwayOrder(PathwayStep pathwayOrder)

Uses of PathwayStep in org.biopax.paxtools.model.level3

Subinterfaces of PathwayStep in org.biopax.paxtools.model.level3

Modifier and Type	Interface and Description
interface	BiochemicalPathwayStep Definition: Imposes ordering on a step in a biochemical pathway.

Methods in org.biopax.paxtools.model.level3 that return types with arguments of type PathwayStep

Modifier and Type	Method and Description
Set<PathwayStep>	PathwayStep.getNextStep()
Set<PathwayStep>	PathwayStep.getNextStepOf()
Set<PathwayStep>	Pathway.getPathwayOrder()
Set<PathwayStep>	Process.getStepProcessOf()

Methods in org.biopax.paxtools.model.level3 with parameters of type PathwayStep

Modifier and Type	Method and Description
void	PathwayStep.addNextStep(PathwayStep newNEXT_STEP)
void	Pathway.addPathwayOrder(PathwayStep order)
void	PathwayStep.removeNextStep(PathwayStep oldNEXT_STEP)
void	Pathway.removePathwayOrder(PathwayStep order)