Uses of Interface
org.biopax.paxtools.model.level3.NucleicAcidReference

Packages that use NucleicAcidReference

Package	Description
org.biopax.paxtools.impl.level3	This package contains the default implementation for BioPAX Level 3.
org.biopax.paxtools.model.level3	This package contains the interfaces that maps classes defined in the BioPAX Level 3 specification.

Uses of NucleicAcidReference in org.biopax.paxtools.impl.level3

Classes in org.biopax.paxtools.impl.level3 that implement NucleicAcidReference

Modifier and Type	Class and Description
class	DnaReferenceImpl
class	DnaRegionReferenceImpl
class	NucleicAcidReferenceImpl
class	NucleicAcidRegionReferenceImpl
class	RnaReferenceImpl
class	RnaRegionReferenceImpl

Methods in org.biopax.paxtools.impl.level3 that return types with arguments of type NucleicAcidReference

Modifier and Type	Method and Description
Set<NucleicAcidReference>	NucleicAcidRegionReferenceImpl.getSubRegionOf()

Uses of NucleicAcidReference in org.biopax.paxtools.model.level3

Subinterfaces of NucleicAcidReference in org.biopax.paxtools.model.level3

Modifier and Type	Interface and Description
interface	DnaReference A DNA reference is a grouping of several DNA entities that are common in sequence and genomic position.
interface	DnaRegionReference Definition: A DNARegionReference is a grouping of several DNARegion entities that are common in sequence and genomic position.
interface	NucleicAcidRegionReference
interface	RnaReference
interface	RnaRegionReference A RNA region reference

Methods in org.biopax.paxtools.model.level3 that return types with arguments of type NucleicAcidReference

Modifier and Type	Method and Description
Set<NucleicAcidReference>	NucleicAcidRegionReference.getSubRegionOf()