org.biopax.paxtools.model.level3

Interface Process

All Superinterfaces:

BioPAXElement, Cloneable, Entity, Level3Element, Named, Observable, Serializable, XReferrable

All Known Subinterfaces:

BiochemicalReaction, Catalysis, ComplexAssembly, Control, Conversion, Degradation, GeneticInteraction, Interaction, Modulation, MolecularInteraction, Pathway, TemplateReaction, TemplateReactionRegulation, Transport, TransportWithBiochemicalReaction

All Known Implementing Classes:

BiochemicalReactionImpl, CatalysisImpl, ComplexAssemblyImpl, ControlImpl, ConversionImpl, DegradationImpl, GeneticInteractionImpl, InteractionImpl, ModulationImpl, MolecularInteractionImpl, PathwayImpl, ProcessImpl, TemplateReactionImpl, TemplateReactionRegulationImpl, TransportImpl, TransportWithBiochemicalReactionImpl

public interface Process
extends Entity

Tagging interface for entities that can participate in a pathway and can be targeted by a control : Pathway and Interaction

Field Summary

Fields inherited from interface org.biopax.paxtools.model.BioPAXElement

UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT

Method Summary

Modifier and Type	Method and Description
Set<Control>	getControlledOf()
Set<Pathway>	getPathwayComponentOf()
Set<PathwayStep>	getStepProcessOf()

Methods inherited from interface org.biopax.paxtools.model.level3.Entity

addAvailability, addDataSource, getAvailability, getDataSource, getParticipantOf, removeAvailability, removeDataSource

Methods inherited from interface org.biopax.paxtools.model.level3.Observable

addEvidence, getEvidence, removeEvidence

Methods inherited from interface org.biopax.paxtools.model.level3.Named

addName, getDisplayName, getName, getStandardName, removeName, setDisplayName, setName, setStandardName

Methods inherited from interface org.biopax.paxtools.model.level3.XReferrable

addXref, getXref, removeXref

Methods inherited from interface org.biopax.paxtools.model.level3.Level3Element

addComment, getComment, removeComment

Methods inherited from interface org.biopax.paxtools.model.BioPAXElement

equivalenceCode, getAnnotations, getModelInterface, getRDFId, isEquivalent

Method Detail

getControlledOf

Set<Control> getControlledOf()

getPathwayComponentOf

Set<Pathway> getPathwayComponentOf()

getStepProcessOf

Set<PathwayStep> getStepProcessOf()