c

org.bdgenomics.adam.cli

ADAM2FastqArgs

class ADAM2FastqArgs extends Args4jBase

Linear Supertypes
Args4jBase, AnyRef, Any
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Inherited
  1. ADAM2FastqArgs
  2. Args4jBase
  3. AnyRef
  4. Any
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Visibility
  1. Public
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Instance Constructors

  1. new ADAM2FastqArgs()

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  4. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  5. var asSingleFile: Boolean
  6. def clone(): AnyRef
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @native() @throws( ... )
  7. var disableFastConcat: Boolean
  8. var disableProjection: Boolean
  9. var doPrintUsage: Boolean
    Definition Classes
    Args4jBase
  10. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  11. def equals(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  12. def finalize(): Unit
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  13. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  14. def hashCode(): Int
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  15. var inputPath: String
  16. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  17. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  18. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  19. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  20. var outputPath: String
  21. var outputPath2: String
  22. var persistLevel: String
  23. var printMetrics: Boolean
    Definition Classes
    Args4jBase
  24. var repartition: Int
  25. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  26. def toString(): String
    Definition Classes
    AnyRef → Any
  27. var validationStringency: ValidationStringency
  28. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  29. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  30. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @native() @throws( ... )
  31. var writeOriginalQualityScores: Boolean

Inherited from Args4jBase

Inherited from AnyRef

Inherited from Any

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