Object

org.bdgenomics.adam.projections

DatabaseVariantAnnotationField

Related Doc: package projections

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object DatabaseVariantAnnotationField extends FieldEnumeration

Enumeration of DatabaseVariantAnnotation field names for predicates and projections.

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FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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  1. DatabaseVariantAnnotationField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
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Type Members

  1. class SchemaVal extends Val with FieldValue

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    Definition Classes
    FieldEnumeration
  2. class Val extends Value with Serializable

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    protected
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    Enumeration
    Annotations
    @SerialVersionUID()
  3. abstract class Value extends Ordered[Value] with Serializable

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    Enumeration
    Annotations
    @SerialVersionUID()
  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable

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    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  4. final def SchemaValue: SchemaVal

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    Attributes
    protected
    Definition Classes
    FieldEnumeration
  5. final def Value(i: Int, name: String): Value

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    Enumeration
  6. final def Value(name: String): Value

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    Enumeration
  7. final def Value(i: Int): Value

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    Enumeration
  8. final def Value: Value

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    protected
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    Enumeration
  9. val alternateAminoAcid: SchemaVal

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  10. val ancestralAllele: SchemaVal

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  11. final def apply(x: Int): Value

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    Definition Classes
    Enumeration
  12. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any
  13. val clinicalSignificance: SchemaVal

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  14. val clinvarId: SchemaVal

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  15. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  16. val cosmicId: SchemaVal

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  17. val dbsnpId: SchemaVal

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  18. val ensemblGeneId: SchemaVal

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  19. val ensemblTranscriptIds: SchemaVal

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  20. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  21. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  22. def finalize(): Unit

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    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  23. val geneSymbol: SchemaVal

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  24. val gerpNr: SchemaVal

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  25. val gerpRs: SchemaVal

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  26. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any
  27. def hashCode(): Int

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    Definition Classes
    AnyRef → Any
  28. val hgvs: SchemaVal

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  29. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any
  30. final def maxId: Int

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    Enumeration
  31. val mutationTasterPred: SchemaVal

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  32. val mutationTasterScore: SchemaVal

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  33. val mutationTasterScoreConverted: SchemaVal

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  34. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  35. var nextId: Int

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    protected
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    Enumeration
  36. var nextName: Iterator[String]

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    protected
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    Enumeration
  37. final def notify(): Unit

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    Definition Classes
    AnyRef
  38. final def notifyAll(): Unit

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    Definition Classes
    AnyRef
  39. val omimId: SchemaVal

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  40. val phylop: SchemaVal

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  41. def readResolve(): AnyRef

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    Attributes
    protected
    Definition Classes
    Enumeration
  42. val recordSchema: Schema

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    Definition Classes
    FieldEnumeration
  43. val referenceAminoAcid: SchemaVal

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  44. val siftPred: SchemaVal

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  45. val siftScore: SchemaVal

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  46. val siftScoreConverted: SchemaVal

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  47. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef
  48. val thousandGenomesAlleleCount: SchemaVal

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  49. val thousandGenomesAlleleFrequency: SchemaVal

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  50. def toString(): String

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    Definition Classes
    Enumeration → AnyRef → Any
  51. def values: ValueSet

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    Definition Classes
    Enumeration
  52. val variant: SchemaVal

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  53. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  54. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
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    Annotations
    @throws( ... )
  55. final def wait(arg0: Long): Unit

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    Definition Classes
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    Annotations
    @throws( ... )
  56. final def withName(s: String): Value

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    Definition Classes
    Enumeration

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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