Package

org.bdgenomics.adam.rdd.read

realignment

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package realignment

Visibility
  1. Public
  2. All

Type Members

  1. class IndelRealignmentTarget extends Logging

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  2. class IndelRealignmentTargetSerializer extends Serializer[IndelRealignmentTarget]

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  3. class RealignmentTargetFinder extends Serializable with Logging

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  4. case class TargetSet(set: TreeSet[IndelRealignmentTarget]) extends Serializable with Product

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  5. class TargetSetSerializer extends Serializer[TargetSet]

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  6. case class ZippedTargetSet(set: TreeSet[(IndelRealignmentTarget, Int)]) extends Serializable with Product

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  7. class ZippedTargetSetSerializer extends Serializer[ZippedTargetSet]

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Value Members

  1. object IndelRealignmentTarget

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  2. object RealignmentTargetFinder extends Serializable

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  3. object TargetOrdering extends Ordering[IndelRealignmentTarget]

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  4. object TargetSet extends Serializable

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  5. object ZippedTargetOrdering extends Ordering[(IndelRealignmentTarget, Int)]

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