Package org.anchoranalysis.mpp.mark.points

Class PointList

Object
org.anchoranalysis.mpp.mark.Mark
org.anchoranalysis.mpp.mark.points.PointListBase
org.anchoranalysis.mpp.mark.points.PointList
All Implemented Interfaces:
Serializable
public class PointList
extends PointListBase
A a list of 3D points.

Internally a set data-structure (as opposed to list) is used to store the points.

See Also:
Serialized Form

  • Constructor Details

    • PointList

      public PointList()
      Constructs an empty PointList.

    • PointList

      public PointList​(Stream<org.anchoranalysis.spatial.point.Point3d> stream)
      Constructs a PointList from a stream of Point3d objects.
      Parameters:
      stream - the stream of Point3d objects

  • Method Details

    • isPointInside

      public byte isPointInside​(org.anchoranalysis.spatial.point.Point3i pointIsInside)
      Description copied from class: Mark
      Determines if a point is inside the mark.
      Specified by:
      isPointInside in class Mark
      Parameters:
      pointIsInside - the point to check
      Returns:
      a byte representing the region membership of the point

    • updateAfterPointsChange

      public void updateAfterPointsChange()
      Description copied from class: PointListBase
      Updates the min and max points after the list of points has changed.
      Overrides:
      updateAfterPointsChange in class PointListBase

    • duplicate

      public Mark duplicate()
      Description copied from class: Mark
      Creates a duplicate of this mark.
      Specified by:
      duplicate in class Mark
      Returns:
      a new Mark instance that is a copy of this one

    • volume

      public double volume​(int regionID)
      Description copied from class: Mark
      Calculates the volume of a specific region of the mark.
      Specified by:
      volume in class Mark
      Parameters:
      regionID - the ID of the region
      Returns:
      the volume of the region

    • toString

      public String toString()
      Overrides:
      toString in class Object

    • scale

      public void scale​(org.anchoranalysis.spatial.scale.ScaleFactor scaleFactor) throws CheckedUnsupportedOperationException
      Scales the points in the list by a given scale factor.
      Specified by:
      scale in class Mark
      Parameters:
      scaleFactor - the scale factor to apply
      Throws:
      CheckedUnsupportedOperationException - if scaling is not supported

    • numberDimensions

      public int numberDimensions()
      Description copied from class: Mark
      Returns the number of dimensions of this mark.
      Specified by:
      numberDimensions in class Mark
      Returns:
      the number of dimensions

    • getName

      public String getName()
      Description copied from class: Mark
      Returns the name of this mark type.
      Specified by:
      getName in class Mark
      Returns:
      the name of the mark

    • centerPoint

      public org.anchoranalysis.spatial.point.Point3d centerPoint()
      Description copied from class: Mark
      Returns the center point of the mark.
      Specified by:
      centerPoint in class Mark
      Returns:
      the center point as a Point3d

    • numberRegions

      public int numberRegions()
      Description copied from class: Mark
      Returns the number of regions in this mark.
      Specified by:
      numberRegions in class Mark
      Returns:
      the number of regions

    • boxAllRegions

      public org.anchoranalysis.spatial.box.BoundingBox boxAllRegions​(Dimensions dimensions)
      Description copied from class: Mark
      Calculates the bounding box for all regions of the mark.
      Specified by:
      boxAllRegions in class Mark
      Parameters:
      dimensions - the dimensions of the space
      Returns:
      the bounding box