Class MultiInputManager

Object

AnchorBean<InputManager<MultiInput>>

InputManager<MultiInput>

InputManagerWithStackReader<MultiInput>

MultiInputManager

public class MultiInputManager
extends InputManagerWithStackReader<MultiInput>

Manages input for MultiInput objects, combining various input sources.

Constructor Summary

Constructors

Constructor	Description
MultiInputManager()
MultiInputManager(String inputName, InputManager<? extends ProvidesStackInput> input)	Creates a new MultiInputManager with specified input name and input manager.

Method Summary

Modifier and Type	Method	Description
List<NamedBean<DerivePath>>	getAppendDictionary()	List of dictionaries to append.
List<NamedBean<DerivePath>>	getAppendFilePath()	List of file paths to append.
List<NamedBean<DerivePath>>	getAppendHistogram()	List of histograms to append.
List<NamedBean<DerivePath>>	getAppendMarks()	List of marks to append.
List<NamedBean<DerivePath>>	getAppendMarksFromAnnotation()	List of marks from annotations (both accepted and rejected) to append.
List<NamedBean<DerivePath>>	getAppendMarksFromAnnotationAcceptedOnly()	List of marks from annotations (accepted only) to append.
List<NamedBean<DerivePath>>	getAppendMarksFromAnnotationRejectedOnly()	List of marks from annotations (rejected only) to append.
List<NamedBean<DerivePath>>	getAppendObjects()	List of object-collections to append to the MultiInput.
List<NamedBean<DerivePath>>	getAppendStack()	List of additional stacks to append.
InputManager<? extends ProvidesStackInput>	getInput()	The input manager for the main stack.
String	getInputName()	The name of the input to be used in the MultiInput.
InputsWithDirectory<MultiInput>	inputs(InputManagerParameters parameters)
void	setAppendDictionary(List<NamedBean<DerivePath>> appendDictionary)	List of dictionaries to append.
void	setAppendFilePath(List<NamedBean<DerivePath>> appendFilePath)	List of file paths to append.
void	setAppendHistogram(List<NamedBean<DerivePath>> appendHistogram)	List of histograms to append.
void	setAppendMarks(List<NamedBean<DerivePath>> appendMarks)	List of marks to append.
void	setAppendMarksFromAnnotation(List<NamedBean<DerivePath>> appendMarksFromAnnotation)	List of marks from annotations (both accepted and rejected) to append.
void	setAppendMarksFromAnnotationAcceptedOnly(List<NamedBean<DerivePath>> appendMarksFromAnnotationAcceptedOnly)	List of marks from annotations (accepted only) to append.
void	setAppendMarksFromAnnotationRejectedOnly(List<NamedBean<DerivePath>> appendMarksFromAnnotationRejectedOnly)	List of marks from annotations (rejected only) to append.
void	setAppendObjects(List<NamedBean<DerivePath>> appendObjects)	List of object-collections to append to the MultiInput.
void	setAppendStack(List<NamedBean<DerivePath>> appendStack)	List of additional stacks to append.
void	setInput(InputManager<? extends ProvidesStackInput> input)	The input manager for the main stack.
void	setInputName(String inputName)	The name of the input to be used in the MultiInput.

Methods inherited from class org.anchoranalysis.image.io.bean.stack.reader.InputManagerWithStackReader

getStackReader, setStackReader

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

MultiInputManager

public MultiInputManager(String inputName,
 InputManager<? extends ProvidesStackInput> input)

Creates a new MultiInputManager with specified input name and input manager.

Parameters:

inputName - the name of the input

input - the input manager for the main stack

MultiInputManager

public MultiInputManager()

Method Details

inputs

public InputsWithDirectory<MultiInput> inputs(InputManagerParameters parameters)
                                       throws InputReadFailedException

Specified by:

inputs in class InputManager<MultiInput>

Throws:

InputReadFailedException

getInputName

public String getInputName()

The name of the input to be used in the MultiInput.

setInputName

public void setInputName(String inputName)

The name of the input to be used in the MultiInput.

getInput

public InputManager<? extends ProvidesStackInput> getInput()

The input manager for the main stack.

setInput

public void setInput(InputManager<? extends ProvidesStackInput> input)

The input manager for the main stack.

getAppendStack

public List<NamedBean<DerivePath>> getAppendStack()

List of additional stacks to append.

setAppendStack

public void setAppendStack(List<NamedBean<DerivePath>> appendStack)

List of additional stacks to append.

getAppendMarks

public List<NamedBean<DerivePath>> getAppendMarks()

List of marks to append.

setAppendMarks

public void setAppendMarks(List<NamedBean<DerivePath>> appendMarks)

List of marks to append.

getAppendMarksFromAnnotation

public List<NamedBean<DerivePath>> getAppendMarksFromAnnotation()

List of marks from annotations (both accepted and rejected) to append.

setAppendMarksFromAnnotation

public void setAppendMarksFromAnnotation(List<NamedBean<DerivePath>> appendMarksFromAnnotation)

List of marks from annotations (both accepted and rejected) to append.

getAppendMarksFromAnnotationAcceptedOnly

public List<NamedBean<DerivePath>> getAppendMarksFromAnnotationAcceptedOnly()

List of marks from annotations (accepted only) to append.

setAppendMarksFromAnnotationAcceptedOnly

public void setAppendMarksFromAnnotationAcceptedOnly(List<NamedBean<DerivePath>> appendMarksFromAnnotationAcceptedOnly)

List of marks from annotations (accepted only) to append.

getAppendMarksFromAnnotationRejectedOnly

public List<NamedBean<DerivePath>> getAppendMarksFromAnnotationRejectedOnly()

List of marks from annotations (rejected only) to append.

setAppendMarksFromAnnotationRejectedOnly

public void setAppendMarksFromAnnotationRejectedOnly(List<NamedBean<DerivePath>> appendMarksFromAnnotationRejectedOnly)

List of marks from annotations (rejected only) to append.

getAppendObjects

public List<NamedBean<DerivePath>> getAppendObjects()

List of object-collections to append to the MultiInput.

setAppendObjects

public void setAppendObjects(List<NamedBean<DerivePath>> appendObjects)

List of object-collections to append to the MultiInput.

getAppendDictionary

public List<NamedBean<DerivePath>> getAppendDictionary()

List of dictionaries to append.

setAppendDictionary

public void setAppendDictionary(List<NamedBean<DerivePath>> appendDictionary)

List of dictionaries to append.

getAppendHistogram

public List<NamedBean<DerivePath>> getAppendHistogram()

List of histograms to append.

setAppendHistogram

public void setAppendHistogram(List<NamedBean<DerivePath>> appendHistogram)

List of histograms to append.

getAppendFilePath

public List<NamedBean<DerivePath>> getAppendFilePath()

List of file paths to append.

setAppendFilePath

public void setAppendFilePath(List<NamedBean<DerivePath>> appendFilePath)

List of file paths to append.