Uses of Class
org.anchoranalysis.image.io.bean.stack.reader.StackReader

Packages that use StackReader

Package	Description
org.anchoranalysis.image.io.bean.stack.metadata.reader	Bean classes for reading ImageMetadata from the file-system.
org.anchoranalysis.image.io.bean.stack.reader	Bean classes for reading raster-files from the filesystem.
org.anchoranalysis.image.io.stack.input	Non-bean classes for reading a Stack from the filesystem.

Uses of StackReader in org.anchoranalysis.image.io.bean.stack.metadata.reader

Methods in org.anchoranalysis.image.io.bean.stack.metadata.reader that return StackReader

Modifier and Type	Method	Description
StackReader	FromStackReader.getStackReader()	The StackReader to use to read the image metadata.

Methods in org.anchoranalysis.image.io.bean.stack.metadata.reader with parameters of type StackReader

Modifier and Type	Method	Description
ImageMetadata	FromStackReader.openFile(Path path, StackReader defaultStackReader, OperationContext context)
abstract ImageMetadata	ImageMetadataReader.openFile(Path path, StackReader defaultStackReader, OperationContext context)	Opens a file containing one or more images but does not read an image.
void	FromStackReader.setStackReader(StackReader stackReader)	The StackReader to use to read the image metadata.

Constructors in org.anchoranalysis.image.io.bean.stack.metadata.reader with parameters of type StackReader

Constructor	Description
FromStackReader(StackReader stackReader)	Create from a StackReader.

Uses of StackReader in org.anchoranalysis.image.io.bean.stack.reader

Subclasses of StackReader in org.anchoranalysis.image.io.bean.stack.reader

Modifier and Type	Class	Description
class	StackReaderOrientationCorrection	A StackReader that supports the correction of orientation as images are read from the file-system.

Methods in org.anchoranalysis.image.io.bean.stack.reader that return StackReader

Modifier and Type	Method	Description
StackReader	InputManagerWithStackReader.getStackReader()	How to read an image from the file-system.

Methods in org.anchoranalysis.image.io.bean.stack.reader with parameters of type StackReader

Modifier and Type	Method	Description
void	InputManagerWithStackReader.setStackReader(StackReader stackReader)	How to read an image from the file-system.

Uses of StackReader in org.anchoranalysis.image.io.stack.input

Methods in org.anchoranalysis.image.io.stack.input with parameters of type StackReader

Modifier and Type	Method	Description
static Mask	MaskReader.openMask(StackReader stackReader, Path path, org.anchoranalysis.image.voxel.binary.values.BinaryValuesInt binaryValues, OperationContext context)	Utility functions for opening a single-channeled stack as a Mask.