Uses of Class
org.anchoranalysis.image.bean.nonbean.segment.SegmentationFailedException

Packages that use SegmentationFailedException

Package	Description
org.anchoranalysis.image.bean.segment.binary	Base classes to perform binary-segmentation.
org.anchoranalysis.image.bean.segment.object	Base classes to segment a channel into objects.

Uses of SegmentationFailedException in org.anchoranalysis.image.bean.segment.binary

Methods in org.anchoranalysis.image.bean.segment.binary that throw SegmentationFailedException

Modifier and Type	Method	Description
abstract org.anchoranalysis.image.voxel.binary.BinaryVoxels<org.anchoranalysis.image.voxel.buffer.primitive.UnsignedByteBuffer>	BinarySegmentation.segment(org.anchoranalysis.image.voxel.VoxelsUntyped voxels, BinarySegmentationParameters parameters, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask)	Performs a segmentation on voxels so that each voxel has an on or off state after the operation.
org.anchoranalysis.image.voxel.binary.BinaryVoxels<org.anchoranalysis.image.voxel.buffer.primitive.UnsignedByteBuffer>	BinarySegmentationReference.segment(org.anchoranalysis.image.voxel.VoxelsUntyped voxels, BinarySegmentationParameters parameters, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask)
org.anchoranalysis.image.voxel.binary.BinaryVoxels<org.anchoranalysis.image.voxel.buffer.primitive.UnsignedByteBuffer>	BinarySegmentationThreshold.segment(org.anchoranalysis.image.voxel.VoxelsUntyped voxels, BinarySegmentationParameters parameters, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask)
org.anchoranalysis.image.voxel.binary.BinaryVoxels<org.anchoranalysis.image.voxel.buffer.primitive.UnsignedByteBuffer>	BinarySegmentationUnary.segment(org.anchoranalysis.image.voxel.VoxelsUntyped voxels, BinarySegmentationParameters parameters, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask)
protected abstract org.anchoranalysis.image.voxel.binary.BinaryVoxels<org.anchoranalysis.image.voxel.buffer.primitive.UnsignedByteBuffer>	BinarySegmentationUnary.segmentFromExistingSegmentation(org.anchoranalysis.image.voxel.VoxelsUntyped voxels, BinarySegmentationParameters parameters, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask, BinarySegmentation segment)	Performs a binary-segmentation, in a similar manner to BinarySegmentation.segment(org.anchoranalysis.image.voxel.VoxelsUntyped, org.anchoranalysis.image.bean.nonbean.segment.BinarySegmentationParameters, java.util.Optional<org.anchoranalysis.image.voxel.object.ObjectMask>) but with the delegate as additional argument.

Uses of SegmentationFailedException in org.anchoranalysis.image.bean.segment.object

Methods in org.anchoranalysis.image.bean.segment.object that throw SegmentationFailedException

Modifier and Type	Method	Description
protected static void	SegmentChannelIntoObjects.checkUnsupported3D(Channel channel)	Throws an exception if the channel has more than one z-slice, as 3D is unsupported by the implementation.
protected static void	SegmentChannelIntoObjects.checkUnsupportedObjectMask(Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask)	Throws an exception if object is present, as it is unsupported by the implementation.
protected static void	SegmentChannelIntoObjects.checkUnsupportedSeeds(Optional<org.anchoranalysis.image.voxel.object.ObjectCollection> seeds)	Throws an exception if seeds is present, as it is unsupported by the implementation.
abstract org.anchoranalysis.image.voxel.object.ObjectCollection	SegmentChannelIntoObjects.segment(Channel channel, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask, Optional<org.anchoranalysis.image.voxel.object.ObjectCollection> seeds)	Segments a channel to produce an object-collection.
org.anchoranalysis.image.voxel.object.ObjectCollection	SegmentChannelIntoObjectsUnary.segment(Channel channel, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> objectMask, Optional<org.anchoranalysis.image.voxel.object.ObjectCollection> seeds)
protected abstract org.anchoranalysis.image.voxel.object.ObjectCollection	SegmentChannelIntoObjectsUnary.segment(Channel channel, Optional<org.anchoranalysis.image.voxel.object.ObjectMask> object, Optional<org.anchoranalysis.image.voxel.object.ObjectCollection> seeds, SegmentChannelIntoObjects upstreamSegmenter)	Creates an ObjectCollection given the segmentation-results provided by the delegate.