AtomPair (BioCommons 3.0.4 API)

java.lang.Object
- pl.poznan.put.torsion.AtomPair

All Implemented Interfaces:

Comparable<AtomPair>

Direct Known Subclasses:

ImmutableAtomPair
```
@Immutable
public abstract class AtomPair
extends Object
implements Comparable<AtomPair>
```
A pair of atoms.

Constructor Summary

Constructors
Constructor Description

AtomPair()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`protected BondLength`	`bondLength()`
`int`	`compareTo(AtomPair t)`
`protected double`	`distance()`
`String`	`generateValidationMessage()`	Generate a validation message if the distance between this atom pair is larger than 150% of the maximum expected bond length (see `Bond.length(AtomType, AtomType)`).

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - AtomPair
```
public AtomPair()
```
- Method Detail
  - generateValidationMessage
```
public final String generateValidationMessage()
```
    Generate a validation message if the distance between this atom pair is larger than 150% of the maximum expected bond length (see Bond.length(AtomType, AtomType)).
    
    Returns:
    
    A message detailing the invalid distance or empty string ("") if all is fine.
  - compareTo
```
public final int compareTo(AtomPair t)
```
    Specified by:
    
    compareTo in interface Comparable<AtomPair>
  - distance
```
@Lazy
protected double distance()
```
  - bondLength
```
@Lazy
protected BondLength bondLength()
```