Uses of Class
pl.poznan.put.structure.formats.Ct.ExtendedEntry

Packages that use Ct.ExtendedEntry

Package	Description
pl.poznan.put.structure.formats

Uses of Ct.ExtendedEntry in pl.poznan.put.structure.formats

Subclasses of Ct.ExtendedEntry in pl.poznan.put.structure.formats

Modifier and Type	Class	Description
class	ImmutableExtendedEntry	Immutable implementation of Ct.ExtendedEntry.

Methods in pl.poznan.put.structure.formats that return Ct.ExtendedEntry

Modifier and Type	Method	Description
static Ct.ExtendedEntry	Ct.ExtendedEntry.fromDotBracketSymbol(DotBracket dotBracket, List<DotBracketSymbol> symbols, int i)	Converts a dot-bracket symbol into an instance of this class.
static Ct.ExtendedEntry	Ct.ExtendedEntry.fromEntry(BpSeq.Entry entry)	Converts a BPSEQ entry into an instance of this class.
static Ct.ExtendedEntry	Ct.ExtendedEntry.fromEntryAndPdbResidue(BpSeq.Entry entry, ChainNumberICode residue, PdbModel model)	Converts a BPSEQ entry into an instance of this class using information from a parsed 3D data.
static Ct.ExtendedEntry	Ct.ExtendedEntry.fromString(String line)	Creates an instance from a string in format: int string int int int int.

Methods in pl.poznan.put.structure.formats that return types with arguments of type Ct.ExtendedEntry

Modifier and Type	Method	Description
abstract SortedSet<Ct.ExtendedEntry>	Ct.entries()
SortedSet<Ct.ExtendedEntry>	ImmutableCt.entries()

Methods in pl.poznan.put.structure.formats with parameters of type Ct.ExtendedEntry

Modifier and Type	Method	Description
ImmutableCt.Builder	ImmutableCt.Builder.addEntries(Ct.ExtendedEntry element)	Adds one element to entries sortedSet.
ImmutableCt.Builder	ImmutableCt.Builder.addEntries(Ct.ExtendedEntry... elements)	Adds elements to entries sortedSet.
int	Ct.ExtendedEntry.compareTo(Ct.ExtendedEntry t)
static ImmutableExtendedEntry	ImmutableExtendedEntry.copyOf(Ct.ExtendedEntry instance)	Creates an immutable copy of a Ct.ExtendedEntry value.
ImmutableExtendedEntry.Builder	ImmutableExtendedEntry.Builder.from(Ct.ExtendedEntry instance)	Fill a builder with attribute values from the provided ExtendedEntry instance.
ImmutableCt	ImmutableCt.withEntries(Ct.ExtendedEntry... elements)	Copy the current immutable object with elements that replace the content of entries.
Ct	Ct.withoutPair(Ct.ExtendedEntry entry)	Creates a copy of this instance, but with the given pair removed.

Method parameters in pl.poznan.put.structure.formats with type arguments of type Ct.ExtendedEntry

Modifier and Type	Method	Description
ImmutableCt.Builder	ImmutableCt.Builder.addAllEntries(Iterable<? extends Ct.ExtendedEntry> elements)	Adds elements to entries sortedSet.
ImmutableCt.Builder	ImmutableCt.Builder.entries(Iterable<? extends Ct.ExtendedEntry> elements)	Sets or replaces all elements for entries sortedSet.
static ImmutableCt	ImmutableCt.of(Iterable<? extends Ct.ExtendedEntry> entries)	Construct a new immutable Ct instance.
static ImmutableCt	ImmutableCt.of(SortedSet<Ct.ExtendedEntry> entries)	Construct a new immutable Ct instance.
ImmutableCt	ImmutableCt.withEntries(Iterable<? extends Ct.ExtendedEntry> elements)	Copy the current immutable object with elements that replace the content of entries.