Package pl.poznan.put.structure.formats

Class ImmutableCombinedStrandFromPdb.Builder

java.lang.Object

pl.poznan.put.structure.formats.ImmutableCombinedStrandFromPdb.Builder

Enclosing class:

ImmutableCombinedStrandFromPdb

@NotThreadSafe
public static final class ImmutableCombinedStrandFromPdb.Builder
extends Object

Builds instances of type ImmutableCombinedStrandFromPdb. Initialize attributes and then invoke the build() method to create an immutable instance.

Builder is not thread-safe and generally should not be stored in a field or collection, but instead used immediately to create instances.

Method Summary

Modifier and Type	Method	Description
ImmutableCombinedStrandFromPdb.Builder	addAllCombineStrands(Iterable<? extends DotBracket> elements)	Adds elements to combineStrands list.
ImmutableCombinedStrandFromPdb.Builder	addAllInputStrands(Iterable<? extends Strand> elements)	Adds elements to inputStrands list.
ImmutableCombinedStrandFromPdb.Builder	addCombineStrands(DotBracket element)	Adds one element to combineStrands list.
ImmutableCombinedStrandFromPdb.Builder	addCombineStrands(DotBracket... elements)	Adds elements to combineStrands list.
ImmutableCombinedStrandFromPdb.Builder	addInputStrands(Strand element)	Adds one element to inputStrands list.
ImmutableCombinedStrandFromPdb.Builder	addInputStrands(Strand... elements)	Adds elements to inputStrands list.
ImmutableCombinedStrandFromPdb	build()	Builds a new ImmutableCombinedStrandFromPdb.
ImmutableCombinedStrandFromPdb.Builder	combineStrands(Iterable<? extends DotBracket> elements)	Sets or replaces all elements for combineStrands list.
ImmutableCombinedStrandFromPdb.Builder	from(AbstractCombinedStrand instance)	Fill a builder with attribute values from the provided pl.poznan.put.structure.formats.AbstractCombinedStrand instance.
ImmutableCombinedStrandFromPdb.Builder	from(CombinedStrandFromPdb instance)	Fill a builder with attribute values from the provided pl.poznan.put.structure.formats.CombinedStrandFromPdb instance.
ImmutableCombinedStrandFromPdb.Builder	from(DotBracket instance)	Fill a builder with attribute values from the provided pl.poznan.put.structure.formats.DotBracket instance.
ImmutableCombinedStrandFromPdb.Builder	inputStrands(Iterable<? extends Strand> elements)	Sets or replaces all elements for inputStrands list.
ImmutableCombinedStrandFromPdb.Builder	inputSymbolToResidue(Map<? extends DotBracketSymbol,? extends PdbResidueIdentifier> entries)	Sets or replaces all mappings from the specified map as entries for the inputSymbolToResidue map.
ImmutableCombinedStrandFromPdb.Builder	putAllInputSymbolToResidue(Map<? extends DotBracketSymbol,? extends PdbResidueIdentifier> entries)	Put all mappings from the specified map as entries to inputSymbolToResidue map.
ImmutableCombinedStrandFromPdb.Builder	putInputSymbolToResidue(Map.Entry<? extends DotBracketSymbol,? extends PdbResidueIdentifier> entry)	Put one entry to the inputSymbolToResidue map.
ImmutableCombinedStrandFromPdb.Builder	putInputSymbolToResidue(DotBracketSymbol key, PdbResidueIdentifier value)	Put one entry to the inputSymbolToResidue map.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

from

public final ImmutableCombinedStrandFromPdb.Builder from(CombinedStrandFromPdb instance)

Fill a builder with attribute values from the provided pl.poznan.put.structure.formats.CombinedStrandFromPdb instance.

Parameters:

instance - The instance from which to copy values

Returns:

this builder for use in a chained invocation

from

public final ImmutableCombinedStrandFromPdb.Builder from(AbstractCombinedStrand instance)

Fill a builder with attribute values from the provided pl.poznan.put.structure.formats.AbstractCombinedStrand instance.

Parameters:

instance - The instance from which to copy values

Returns:

this builder for use in a chained invocation

from

public final ImmutableCombinedStrandFromPdb.Builder from(DotBracket instance)

Fill a builder with attribute values from the provided pl.poznan.put.structure.formats.DotBracket instance.

Parameters:

instance - The instance from which to copy values

Returns:

this builder for use in a chained invocation

addCombineStrands

public final ImmutableCombinedStrandFromPdb.Builder addCombineStrands(DotBracket element)

Adds one element to combineStrands list.

Parameters:

element - A combineStrands element

Returns:

this builder for use in a chained invocation

addCombineStrands

public final ImmutableCombinedStrandFromPdb.Builder addCombineStrands(DotBracket... elements)

Adds elements to combineStrands list.

Parameters:

elements - An array of combineStrands elements

Returns:

this builder for use in a chained invocation

combineStrands

public final ImmutableCombinedStrandFromPdb.Builder combineStrands(Iterable<? extends DotBracket> elements)

Sets or replaces all elements for combineStrands list.

Parameters:

elements - An iterable of combineStrands elements

Returns:

this builder for use in a chained invocation

addAllCombineStrands

public final ImmutableCombinedStrandFromPdb.Builder addAllCombineStrands(Iterable<? extends DotBracket> elements)

Adds elements to combineStrands list.

Parameters:

elements - An iterable of combineStrands elements

Returns:

this builder for use in a chained invocation

addInputStrands

public final ImmutableCombinedStrandFromPdb.Builder addInputStrands(Strand element)

Adds one element to inputStrands list.

Parameters:

element - A inputStrands element

Returns:

this builder for use in a chained invocation

addInputStrands

public final ImmutableCombinedStrandFromPdb.Builder addInputStrands(Strand... elements)

Adds elements to inputStrands list.

Parameters:

elements - An array of inputStrands elements

Returns:

this builder for use in a chained invocation

inputStrands

public final ImmutableCombinedStrandFromPdb.Builder inputStrands(Iterable<? extends Strand> elements)

Sets or replaces all elements for inputStrands list.

Parameters:

elements - An iterable of inputStrands elements

Returns:

this builder for use in a chained invocation

addAllInputStrands

public final ImmutableCombinedStrandFromPdb.Builder addAllInputStrands(Iterable<? extends Strand> elements)

Adds elements to inputStrands list.

Parameters:

elements - An iterable of inputStrands elements

Returns:

this builder for use in a chained invocation

putInputSymbolToResidue

public final ImmutableCombinedStrandFromPdb.Builder putInputSymbolToResidue(DotBracketSymbol key,
                                                                            PdbResidueIdentifier value)

Put one entry to the inputSymbolToResidue map.

Parameters:

key - The key in the inputSymbolToResidue map

value - The associated value in the inputSymbolToResidue map

Returns:

this builder for use in a chained invocation

putInputSymbolToResidue

public final ImmutableCombinedStrandFromPdb.Builder putInputSymbolToResidue(Map.Entry<? extends DotBracketSymbol,? extends PdbResidueIdentifier> entry)

Put one entry to the inputSymbolToResidue map. Nulls are not permitted

Parameters:

entry - The key and value entry

Returns:

this builder for use in a chained invocation

inputSymbolToResidue

public final ImmutableCombinedStrandFromPdb.Builder inputSymbolToResidue(Map<? extends DotBracketSymbol,? extends PdbResidueIdentifier> entries)

Sets or replaces all mappings from the specified map as entries for the inputSymbolToResidue map. Nulls are not permitted

Parameters:

entries - The entries that will be added to the inputSymbolToResidue map

Returns:

this builder for use in a chained invocation

putAllInputSymbolToResidue

public final ImmutableCombinedStrandFromPdb.Builder putAllInputSymbolToResidue(Map<? extends DotBracketSymbol,? extends PdbResidueIdentifier> entries)

Put all mappings from the specified map as entries to inputSymbolToResidue map. Nulls are not permitted

Parameters:

entries - The entries that will be added to the inputSymbolToResidue map

Returns:

this builder for use in a chained invocation

build

public ImmutableCombinedStrandFromPdb build()

Builds a new ImmutableCombinedStrandFromPdb.

Returns:

An immutable instance of CombinedStrandFromPdb

Throws:

IllegalStateException - if any required attributes are missing