Uses of Class
pl.poznan.put.structure.QuantifiedBasePair

Packages that use QuantifiedBasePair

Package	Description
pl.poznan.put.pdb.analysis	Contains classes which work on data from PDB or mmCIF files.
pl.poznan.put.structure	Package contains classes useful in describing secondary structure (base pairs, helices, etc.)

Uses of QuantifiedBasePair in pl.poznan.put.pdb.analysis

Methods in pl.poznan.put.pdb.analysis that return types with arguments of type QuantifiedBasePair

Modifier and Type	Method	Description
List<QuantifiedBasePair>	CifModel.basePairs()
abstract List<QuantifiedBasePair>	DefaultCifModel.basePairs()
List<QuantifiedBasePair>	ImmutableDefaultCifModel.basePairs()

Methods in pl.poznan.put.pdb.analysis with parameters of type QuantifiedBasePair

Modifier and Type	Method	Description
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.addBasePairs(QuantifiedBasePair element)	Adds one element to basePairs list.
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.addBasePairs(QuantifiedBasePair... elements)	Adds elements to basePairs list.
ImmutableDefaultCifModel	ImmutableDefaultCifModel.withBasePairs(QuantifiedBasePair... elements)	Copy the current immutable object with elements that replace the content of basePairs.

Method parameters in pl.poznan.put.pdb.analysis with type arguments of type QuantifiedBasePair

Modifier and Type	Method	Description
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.addAllBasePairs(Iterable<? extends QuantifiedBasePair> elements)	Adds elements to basePairs list.
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.basePairs(Iterable<? extends QuantifiedBasePair> elements)	Sets or replaces all elements for basePairs list.
ImmutableDefaultCifModel	ImmutableDefaultCifModel.withBasePairs(Iterable<? extends QuantifiedBasePair> elements)	Copy the current immutable object with elements that replace the content of basePairs.

Uses of QuantifiedBasePair in pl.poznan.put.structure

Subclasses of QuantifiedBasePair in pl.poznan.put.structure

Modifier and Type	Class	Description
class	ImmutableQuantifiedBasePair	Immutable implementation of QuantifiedBasePair.

Methods in pl.poznan.put.structure with parameters of type QuantifiedBasePair

Modifier and Type	Method	Description
static ImmutableQuantifiedBasePair	ImmutableQuantifiedBasePair.copyOf(QuantifiedBasePair instance)	Creates an immutable copy of a QuantifiedBasePair value.
ImmutableQuantifiedBasePair.Builder	ImmutableQuantifiedBasePair.Builder.from(QuantifiedBasePair instance)	Fill a builder with attribute values from the provided pl.poznan.put.structure.QuantifiedBasePair instance.