Uses of Class
pl.poznan.put.rna.InteractionType

Packages that use InteractionType

Package	Description
pl.poznan.put.rna
pl.poznan.put.structure	Package contains classes useful in describing secondary structure (base pairs, helices, etc.)

Uses of InteractionType in pl.poznan.put.rna

Subclasses of InteractionType in pl.poznan.put.rna

Modifier and Type	Class	Description
class	ImmutableInteractionType	Immutable implementation of InteractionType.

Fields in pl.poznan.put.rna declared as InteractionType

Modifier and Type	Field	Description
static InteractionType	InteractionType.BASE_BASE	A base-base interaction, base pair.
static InteractionType	InteractionType.BASE_BASE_1H	A weak base-base interaction, based on a single hydrogen bond only.
static InteractionType	InteractionType.BASE_PHOSPHATE	A base-phosphate interaction (see BPh).
static InteractionType	InteractionType.BASE_RIBOSE	A base-ribose interaction (see BR).
static InteractionType	InteractionType.OTHER	Another interaction type.
static InteractionType	InteractionType.STACKING	A stacking interaction.
static InteractionType	InteractionType.SUGAR_SUGAR	A ribose-ribose interaction.

Methods in pl.poznan.put.rna that return InteractionType

Modifier and Type	Method	Description
InteractionType	InteractionType.invert()

Methods in pl.poznan.put.rna with parameters of type InteractionType

Modifier and Type	Method	Description
int	InteractionType.compareTo(InteractionType t)
static ImmutableInteractionType	ImmutableInteractionType.copyOf(InteractionType instance)	Creates an immutable copy of a InteractionType value.
ImmutableInteractionType.Builder	ImmutableInteractionType.Builder.from(InteractionType instance)	Fill a builder with attribute values from the provided InteractionType instance.

Uses of InteractionType in pl.poznan.put.structure

Methods in pl.poznan.put.structure that return InteractionType

Modifier and Type	Method	Description
InteractionType	AnalyzedBasePair.interactionType()
default InteractionType	ClassifiedBasePair.interactionType()
InteractionType	ImmutableAnalyzedBasePair.interactionType()
InteractionType	ImmutableQuantifiedBasePair.interactionType()
InteractionType	QuantifiedBasePair.interactionType()

Methods in pl.poznan.put.structure with parameters of type InteractionType

Modifier and Type	Method	Description
ImmutableAnalyzedBasePair.Builder	ImmutableAnalyzedBasePair.Builder.interactionType(InteractionType interactionType)	Initializes the value for the interactionType attribute.
ImmutableQuantifiedBasePair.Builder	ImmutableQuantifiedBasePair.Builder.interactionType(InteractionType interactionType)	Initializes the value for the interactionType attribute.
ImmutableAnalyzedBasePair	ImmutableAnalyzedBasePair.withInteractionType(InteractionType value)	Copy the current immutable object by setting a value for the interactionType attribute.
ImmutableQuantifiedBasePair	ImmutableQuantifiedBasePair.withInteractionType(InteractionType value)	Copy the current immutable object by setting a value for the interactionType attribute.