Package pl.poznan.put.rna

Class BasePairParameters

java.lang.Object

pl.poznan.put.rna.BasePairParameters

Direct Known Subclasses:

ImmutableBasePairParameters

@Immutable
public abstract class BasePairParameters
extends Object

Constructor Summary

Constructors

Constructor	Description
BasePairParameters()

Method Summary

Modifier and Type	Method	Description
abstract Angle	buckle()
abstract Angle	interBaseAngle()
static BasePairParameters	of(StandardReferenceFrame primary, StandardReferenceFrame secondary)
abstract Angle	opening()
abstract Angle	propeller()
abstract double	shear()
abstract double	stagger()
abstract double	stretch()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BasePairParameters

public BasePairParameters()

Method Detail

of

public static BasePairParameters of(StandardReferenceFrame primary,
                                    StandardReferenceFrame secondary)

shear

@Parameter(order=1)
public abstract double shear()

stretch

@Parameter(order=2)
public abstract double stretch()

stagger

@Parameter(order=3)
public abstract double stagger()

buckle

@Parameter(order=4)
public abstract Angle buckle()

propeller

@Parameter(order=5)
public abstract Angle propeller()

opening

@Parameter(order=6)
public abstract Angle opening()

interBaseAngle

@Parameter(order=7)
public abstract Angle interBaseAngle()