Package pl.poznan.put.protein

Enum AminoAcidTorsionAngle

java.lang.Object

java.lang.Enum<AminoAcidTorsionAngle>

pl.poznan.put.protein.AminoAcidTorsionAngle

All Implemented Interfaces:

Serializable, Comparable<AminoAcidTorsionAngle>, DisplayableExportable, MasterTorsionAngleType

public enum AminoAcidTorsionAngle
extends Enum<AminoAcidTorsionAngle>
implements MasterTorsionAngleType

A torsion angle defined for proteins.

Enum Constant Summary

Enum Constants

Enum Constant	Description
CALPHA
CHI1
CHI2
CHI3
CHI4
CHI5
OMEGA
PHI
PSI

Method Summary

Modifier and Type	Method	Description
List<TorsionAngleType>	angleTypes()
String	exportName()
String	longDisplayName()
Range	range(Angle angle)	Finds a matching range for the given angle value.
String	shortDisplayName()
static AminoAcidTorsionAngle	valueOf(String name)	Returns the enum constant of this type with the specified name.
static AminoAcidTorsionAngle[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

PHI

public static final AminoAcidTorsionAngle PHI

PSI

public static final AminoAcidTorsionAngle PSI

OMEGA

public static final AminoAcidTorsionAngle OMEGA

CALPHA

public static final AminoAcidTorsionAngle CALPHA

CHI1

public static final AminoAcidTorsionAngle CHI1

CHI2

public static final AminoAcidTorsionAngle CHI2

CHI3

public static final AminoAcidTorsionAngle CHI3

CHI4

public static final AminoAcidTorsionAngle CHI4

CHI5

public static final AminoAcidTorsionAngle CHI5

Method Detail

values

public static AminoAcidTorsionAngle[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (AminoAcidTorsionAngle c : AminoAcidTorsionAngle.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static AminoAcidTorsionAngle valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

angleTypes

public List<TorsionAngleType> angleTypes()

Specified by:

angleTypes in interface MasterTorsionAngleType

Returns:

The list of basic angle types this type consists of.

range

public Range range(Angle angle)

Description copied from interface: MasterTorsionAngleType

Finds a matching range for the given angle value.

Specified by:

range in interface MasterTorsionAngleType

Parameters:

angle - The angle value to find the range for.

Returns:

An instance of Range which incorporates this angle.

shortDisplayName

public String shortDisplayName()

Specified by:

shortDisplayName in interface DisplayableExportable

Returns:

A short name to be shown in UI summary.

longDisplayName

public String longDisplayName()

Specified by:

longDisplayName in interface DisplayableExportable

Returns:

A long name to be shown in UI, may contain Unicode.

exportName

public String exportName()

Specified by:

exportName in interface DisplayableExportable

Returns:

A name to be used during export to output file, should be ASCII only.