Uses of Package
pl.poznan.put.pdb
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Packages that use pl.poznan.put.pdb Package Description pl.poznan.put.external.dssr pl.poznan.put.pdb Contains classes responsible for PDB/mmCIF data modelling and analysis.pl.poznan.put.pdb.analysis Contains classes which work on data from PDB or mmCIF files.pl.poznan.put.rna pl.poznan.put.structure Package contains classes useful in describing secondary structure (base pairs, helices, etc.)pl.poznan.put.structure.formats pl.poznan.put.torsion Contains classes dealing with torsion angles handling. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.external.dssr Class Description PdbNamedResidueIdentifier Class that represents a residue identifier with a known name. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.pdb Class Description ChainNumberICode A set of methods that allow to address a residue by its chain name, residue number and insertion code.ExperimentalTechnique An experimental technique used to solve a structure (according to the PDB sources).ImmutablePdbAtomLine Immutable implementation ofPdbAtomLine.ImmutablePdbAtomLine.Builder Builds instances of typeImmutablePdbAtomLine.ImmutablePdbExpdtaLine Immutable implementation ofPdbExpdtaLine.ImmutablePdbExpdtaLine.Builder Builds instances of typeImmutablePdbExpdtaLine.ImmutablePdbHeaderLine Immutable implementation ofPdbHeaderLine.ImmutablePdbHeaderLine.Builder Builds instances of typeImmutablePdbHeaderLine.ImmutablePdbModresLine Immutable implementation ofPdbModresLine.ImmutablePdbModresLine.Builder Builds instances of typeImmutablePdbModresLine.ImmutablePdbNamedResidueIdentifier Immutable implementation ofPdbNamedResidueIdentifier.ImmutablePdbNamedResidueIdentifier.Builder Builds instances of typeImmutablePdbNamedResidueIdentifier.ImmutablePdbRemark2Line Immutable implementation ofPdbRemark2Line.ImmutablePdbRemark2Line.Builder Builds instances of typeImmutablePdbRemark2Line.ImmutablePdbRemark465Line Immutable implementation ofPdbRemark465Line.ImmutablePdbRemark465Line.Builder Builds instances of typeImmutablePdbRemark465Line.ImmutablePdbResidueIdentifier Immutable implementation ofPdbResidueIdentifier.ImmutablePdbResidueIdentifier.Builder Builds instances of typeImmutablePdbResidueIdentifier.ImmutablePdbTitleLine Immutable implementation ofPdbTitleLine.ImmutablePdbTitleLine.Builder Builds instances of typeImmutablePdbTitleLine.PdbAtomLine Representation of ATOM and HETATM lines in both PDB and mmCIF files.PdbExpdtaLine A representation of EXPDTA line in PDB files.PdbHeaderLine A representation of HEADER file in PDB format.PdbModresLine A representation of MODRES line in PDB format.PdbNamedResidueIdentifier Class that represents a residue identifier with a known name.PdbRemark2Line A representation of REMARK 2 line which describes experimental resolution.PdbRemark465Line A representation of REMARK 465 in PDB format which describes missing residues.PdbResidueIdentifier A residue identifier is used only to address a residue in the structure.PdbTitleLine A representation of TITLE line in PDB format. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.pdb.analysis Class Description ChainNumberICode A set of methods that allow to address a residue by its chain name, residue number and insertion code.PdbAtomLine Representation of ATOM and HETATM lines in both PDB and mmCIF files.PdbExpdtaLine A representation of EXPDTA line in PDB files.PdbHeaderLine A representation of HEADER file in PDB format.PdbModresLine A representation of MODRES line in PDB format.PdbNamedResidueIdentifier Class that represents a residue identifier with a known name.PdbRemark2Line A representation of REMARK 2 line which describes experimental resolution.PdbRemark465Line A representation of REMARK 465 in PDB format which describes missing residues.PdbResidueIdentifier A residue identifier is used only to address a residue in the structure. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.rna Class Description PdbAtomLine Representation of ATOM and HETATM lines in both PDB and mmCIF files. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.structure Class Description PdbNamedResidueIdentifier Class that represents a residue identifier with a known name. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.structure.formats Class Description ChainNumberICode A set of methods that allow to address a residue by its chain name, residue number and insertion code.PdbNamedResidueIdentifier Class that represents a residue identifier with a known name.PdbResidueIdentifier A residue identifier is used only to address a residue in the structure. -
Classes in pl.poznan.put.pdb used by pl.poznan.put.torsion Class Description PdbAtomLine Representation of ATOM and HETATM lines in both PDB and mmCIF files.