Uses of Class
pl.poznan.put.pdb.PdbModresLine

Packages that use PdbModresLine

Package	Description
pl.poznan.put.pdb	Contains classes responsible for PDB/mmCIF data modelling and analysis.
pl.poznan.put.pdb.analysis	Contains classes which work on data from PDB or mmCIF files.

Uses of PdbModresLine in pl.poznan.put.pdb

Subclasses of PdbModresLine in pl.poznan.put.pdb

Modifier and Type	Class	Description
class	ImmutablePdbModresLine	Immutable implementation of PdbModresLine.

Methods in pl.poznan.put.pdb that return PdbModresLine

Modifier and Type	Method	Description
static PdbModresLine	PdbModresLine.parse(String line)	Parses text with MODRES line in PDB format.

Methods in pl.poznan.put.pdb with parameters of type PdbModresLine

Modifier and Type	Method	Description
static ImmutablePdbModresLine	ImmutablePdbModresLine.copyOf(PdbModresLine instance)	Creates an immutable copy of a PdbModresLine value.
ImmutablePdbModresLine.Builder	ImmutablePdbModresLine.Builder.from(PdbModresLine instance)	Fill a builder with attribute values from the provided pl.poznan.put.pdb.PdbModresLine instance.

Uses of PdbModresLine in pl.poznan.put.pdb.analysis

Methods in pl.poznan.put.pdb.analysis that return PdbModresLine

Modifier and Type	Method	Description
default PdbModresLine	PdbModel.modificationDetails(PdbResidueIdentifier query)	Provides details about modification of the residue.

Methods in pl.poznan.put.pdb.analysis that return types with arguments of type PdbModresLine

Modifier and Type	Method	Description
abstract List<PdbModresLine>	DefaultCifModel.modifiedResidues()
abstract List<PdbModresLine>	DefaultPdbModel.modifiedResidues()
List<PdbModresLine>	ImmutableDefaultCifModel.modifiedResidues()
List<PdbModresLine>	ImmutableDefaultPdbModel.modifiedResidues()
List<PdbModresLine>	PdbModel.modifiedResidues()

Methods in pl.poznan.put.pdb.analysis with parameters of type PdbModresLine

Modifier and Type	Method	Description
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.addModifiedResidues(PdbModresLine element)	Adds one element to modifiedResidues list.
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.addModifiedResidues(PdbModresLine... elements)	Adds elements to modifiedResidues list.
ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addModifiedResidues(PdbModresLine element)	Adds one element to modifiedResidues list.
ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addModifiedResidues(PdbModresLine... elements)	Adds elements to modifiedResidues list.
ImmutableDefaultCifModel	ImmutableDefaultCifModel.withModifiedResidues(PdbModresLine... elements)	Copy the current immutable object with elements that replace the content of modifiedResidues.
ImmutableDefaultPdbModel	ImmutableDefaultPdbModel.withModifiedResidues(PdbModresLine... elements)	Copy the current immutable object with elements that replace the content of modifiedResidues.

Method parameters in pl.poznan.put.pdb.analysis with type arguments of type PdbModresLine

Modifier and Type	Method	Description
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.addAllModifiedResidues(Iterable<? extends PdbModresLine> elements)	Adds elements to modifiedResidues list.
ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.addAllModifiedResidues(Iterable<? extends PdbModresLine> elements)	Adds elements to modifiedResidues list.
ImmutableDefaultCifModel.Builder	ImmutableDefaultCifModel.Builder.modifiedResidues(Iterable<? extends PdbModresLine> elements)	Sets or replaces all elements for modifiedResidues list.
ImmutableDefaultPdbModel.Builder	ImmutableDefaultPdbModel.Builder.modifiedResidues(Iterable<? extends PdbModresLine> elements)	Sets or replaces all elements for modifiedResidues list.
ImmutableDefaultCifModel	ImmutableDefaultCifModel.withModifiedResidues(Iterable<? extends PdbModresLine> elements)	Copy the current immutable object with elements that replace the content of modifiedResidues.
ImmutableDefaultPdbModel	ImmutableDefaultPdbModel.withModifiedResidues(Iterable<? extends PdbModresLine> elements)	Copy the current immutable object with elements that replace the content of modifiedResidues.