ResidueTorsionAngles (BioCommons 3.0.4 API)

java.lang.Object
- pl.poznan.put.pdb.analysis.ResidueTorsionAngles

Direct Known Subclasses:

ImmutableResidueTorsionAngles
```
@Immutable
public abstract class ResidueTorsionAngles
extends Object
```
A collection of torsion angles values for a single residue.

Constructor Summary

Constructors
Constructor Description

ResidueTorsionAngles()

Method Summary

All Methods Static Methods Instance Methods Abstract Methods Concrete Methods
Modifier and Type	Method	Description
`static ResidueTorsionAngles`	`calculate(List<PdbResidue> residues, int index)`	Calculates all torsion angles' values in the given residue.
`abstract PdbResidueIdentifier`	`identifier()`
`Angle`	`value(MasterTorsionAngleType masterType)`	Finds the value of a master torsion angle type in this collection.
`Angle`	`value(TorsionAngleType type)`	Finds the value of specific torsion angle type in this collection.
`protected abstract List<TorsionAngleValue>`	`values()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - ResidueTorsionAngles
```
public ResidueTorsionAngles()
```
- Method Detail
  - calculate
```
public static ResidueTorsionAngles calculate(List<PdbResidue> residues,
                                             int index)
```
    Calculates all torsion angles' values in the given residue.
    
    Parameters:
    
    residues - The list of all residues.
    
    index - The index of residue in the list.
    
    Returns:
    
    An instance of this class with all torsion angles' values calculated.
  - identifier
```
@Parameter(order=1)
public abstract PdbResidueIdentifier identifier()
```
    Returns:
    
    The residue identifier.
  - values
```
@Parameter(order=2)
protected abstract List<TorsionAngleValue> values()
```
    Returns:
    
    The list of torsion angles' values.
  - value
```
public final Angle value(TorsionAngleType type)
```
    Finds the value of specific torsion angle type in this collection.
    
    Parameters:
    
    type - The type of torsion angle to look for.
    
    Returns:
    
    The value of torsion angle in this residue or NaN if none found.
  - value
```
public final Angle value(MasterTorsionAngleType masterType)
```
    Finds the value of a master torsion angle type in this collection.
    
    Parameters:
    
    masterType - The master torsion angle tyoe to look for.
    
    Returns:
    
    The value of torsion angle in this residue or NaN if none found.