org.coode.owlapi.obo.parser

Class OBOOntologyFormat

java.lang.Object

org.semanticweb.owlapi.model.OWLOntologyFormat

org.coode.owlapi.obo.parser.OBOOntologyFormat

All Implemented Interfaces:

Serializable

public class OBOOntologyFormat
extends org.semanticweb.owlapi.model.OWLOntologyFormat

Author:

Matthew Horridge, The University Of Manchester, Bio-Health Informatics Group, Date: 10-Jan-2007

See Also:

Serialized Form

Field Summary

Fields inherited from class org.semanticweb.owlapi.model.OWLOntologyFormat

USE_INTERMEDIATE_OUTPUT_FILE

Constructor Summary

Constructors

Constructor and Description
OBOOntologyFormat()

Method Summary

Modifier and Type	Method and Description
IDSpaceManager	getIdSpaceManager() Gets the OBO id-space manager.
void	setIDSpaceManager(IDSpaceManager m)
String	toString()

Methods inherited from class org.semanticweb.owlapi.model.OWLOntologyFormat

asPrefixOWLOntologyFormat, equals, getOntologyLoaderMetaData, getParameter, hashCode, isPrefixOWLOntologyFormat, setOntologyLoaderMetaData, setParameter

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

OBOOntologyFormat

public OBOOntologyFormat()

Method Detail

toString

public String toString()

Overrides:

toString in class Object

setIDSpaceManager

public void setIDSpaceManager(IDSpaceManager m)

Parameters:

m - An IDSpaceManager which specifies mappings between id prefixes and IRI prefixes.

getIdSpaceManager

public IDSpaceManager getIdSpaceManager()

Gets the OBO id-space manager. This is NOT the same as a prefix manager.

Returns:

The IDSpaceManager for this format. For ontologies parsed from an OBO file this will contain any id prefix to IRI prefix mappings that were parsed out of the file (from id-space tags). Not null.