org.coode.owlapi.obo12.parser

Class OBO12DocumentFormat

java.lang.Object

org.semanticweb.owlapi.model.OWLOntologyFormat

org.coode.owlapi.obo12.parser.OBO12DocumentFormat

All Implemented Interfaces:

Serializable

public class OBO12DocumentFormat
extends OWLOntologyFormat

Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

See Also:

Serialized Form

Field Summary

Fields inherited from class org.semanticweb.owlapi.model.OWLOntologyFormat

USE_INTERMEDIATE_OUTPUT_FILE

Constructor Summary

Constructors

Constructor and Description
OBO12DocumentFormat()

Method Summary

Modifier and Type	Method and Description
Collection<String>	getCommonExtensions()
org.coode.owlapi.obo12.parser.IDSpaceManager	getIdSpaceManager() Gets the OBO id-space manager.
void	setIDSpaceManager(org.coode.owlapi.obo12.parser.IDSpaceManager m)
String	toString()

Methods inherited from class org.semanticweb.owlapi.model.OWLOntologyFormat

asPrefixOWLOntologyFormat, equals, getOntologyLoaderMetaData, getParameter, hashCode, isPrefixOWLOntologyFormat, setOntologyLoaderMetaData, setParameter

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

OBO12DocumentFormat

public OBO12DocumentFormat()

Method Detail

setIDSpaceManager

public void setIDSpaceManager(org.coode.owlapi.obo12.parser.IDSpaceManager m)

Parameters:

m - An IDSpaceManager which specifies mappings between id prefixes and IRI prefixes.

getIdSpaceManager

public org.coode.owlapi.obo12.parser.IDSpaceManager getIdSpaceManager()

Gets the OBO id-space manager. This is NOT the same as a prefix manager.

Returns:

The IDSpaceManager for this format. For ontologies parsed from an OBO file this will contain any id prefix to IRI prefix mappings that were parsed out of the file (from id-space tags). Not null.

toString

public String toString()

Overrides:

toString in class Object

getCommonExtensions

public Collection<String> getCommonExtensions()

Overrides:

getCommonExtensions in class OWLOntologyFormat