org.obolibrary.obo2owl

Class OwlStringTools

java.lang.Object

org.obolibrary.obo2owl.OwlStringTools

public class OwlStringTools
extends Object

Tools to read and write a set of owl axioms to/from a string. Used to preserve untranslatable axioms in an owl2obo conversion.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	OwlStringTools.OwlStringException Exception indicating an un-recoverable error during the handling of axiom strings.

Constructor Summary

Constructors

Constructor and Description
OwlStringTools()

Method Summary

Modifier and Type	Method and Description
static String	translate(Set<org.semanticweb.owlapi.model.OWLAxiom> axioms, org.semanticweb.owlapi.model.OWLOntologyManager translationManager) Create a string for the given set of axioms.
static Set<org.semanticweb.owlapi.model.OWLAxiom>	translate(String axioms, org.semanticweb.owlapi.model.OWLOntologyManager translationManager, org.semanticweb.owlapi.model.OWLOntologyLoaderConfiguration config) Parse the axioms from the given axiom string.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OwlStringTools

public OwlStringTools()

Method Detail

translate

public static String translate(Set<org.semanticweb.owlapi.model.OWLAxiom> axioms,
                               org.semanticweb.owlapi.model.OWLOntologyManager translationManager)
                        throws OwlStringTools.OwlStringException

Create a string for the given set of axioms. Return null for empty sets or if the set is null.

Parameters:

axioms - axioms

translationManager - translationManager

Returns:

string or null

Throws:

OwlStringTools.OwlStringException - OwlStringException

See Also:

translate(String, OWLOntologyManager,org.semanticweb.owlapi.model.OWLOntologyLoaderConfiguration)

translate

public static Set<org.semanticweb.owlapi.model.OWLAxiom> translate(String axioms,
                                                                   org.semanticweb.owlapi.model.OWLOntologyManager translationManager,
                                                                   org.semanticweb.owlapi.model.OWLOntologyLoaderConfiguration config)
                                                            throws OwlStringTools.OwlStringException

Parse the axioms from the given axiom string. Returns null for empty and null strings.

Parameters:

axioms - axioms

translationManager - translationManager

config - the loader configuration, passed to the parser

Returns:

set of axioms or null

Throws:

OwlStringTools.OwlStringException - OwlStringException

See Also:

translate(Set,OWLOntologyManager)