Package org.coode.owlapi.obo.parser

Interface Summary
OBOParserConstants Token literal values and constants.
OBOParserHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

TagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

Concrete implementations of this interface allow specific behaviour for processing specific tag value pairs in an OBO file to be specified.

 

Class Summary
AbstractTagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

AltIdTagValueHandler Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 10/05/2012
AsymmetricHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

DataVersionTagValueHandler Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 19/04/2012
DefaultNamespaceTagValueHandler Author: Matthew Horridge
The University Of Manchester
Information Management Group
Date: 01-Sep-2008

OBO Namespaces are NOT like XML Namespaces.

DefTagValueHandler Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 18/04/2012
DisjointFromHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

DomainHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 20-May-2007

IDSpaceManager Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 18/04/2012
IDSpaceTagValueHandler Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 18/04/2012
IDTagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

IntersectionOfHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

InverseHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

IsATagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

IsObsoleteTagValueHandler Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 18/04/2012
JavaCharStream An implementation of interface CharStream, where the stream is assumed to contain only ASCII characters (with java-like unicode escape processing).
Modifiers Author: Matthew Horridge
The University of Manchester
Bio-Health Informatics Group
Date: 03/02/2011
NameTagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

OBOConsumer Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

OBOFrame Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 19/04/2012
OBOIdTranslator Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 19/04/2012
OBOOntologyFormat Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

OBOParser  
OBOParserFactory Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

OBOParserHandlerAdapter Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

OBOParserTokenManager Token Manager.
OBOTagValuePair Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 19/04/2012
OntologyTagValueHandler Author: Matthew Horridge
The University of Manchester
Bio-Health Informatics Group
Date: 03/02/2011
OWLOBOParser Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

PartOfTagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

RawFrameHandler Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 19/04/2012
ReflexiveHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

RelationshipTagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

SymmetricTagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

SynonymTagValueHandler Author: Matthew Horridge
The University of Manchester
Bio-Health Informatics Group
Date: 03/02/2011
SynonymTypeDefTagHandler Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 18/04/2012
Token Describes the input token stream.
TransitiveOverHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

TransitiveTagValueHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

UnionOfHandler Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 06-Mar-2007

XRefTagHandler Author: Matthew Horridge
The University of Manchester
Bio-Health Informatics Group
Date: 03/02/2011
 

Enum Summary
OBOIdType Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 19/04/2012
OBOPrefix Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 18/04/2012
OBOVocabulary Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 10-Jan-2007

SynonymScope Author: Matthew Horridge
Stanford University
Bio-Medical Informatics Research Group
Date: 18/04/2012
 

Exception Summary
OBOParserException Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 13-Apr-2007

ParseException This exception is thrown when parse errors are encountered.
 

Error Summary
TokenMgrError Token Manager Error.
 



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